MCPymol

15 starsMITCommunity

Install to Claude Code

This server doesn't publish a one-line install command. Follow the setup in the source repository.

Summary

A Model Context Protocol server that lets you drive PyMOL with natural language, enabling structure loading, analytical views, measurements, and protein exploration through AI assistants.

Overview

A Model Context Protocol server that lets you drive PyMOL with natural language, enabling structure loading, analytical views, measurements, and protein exploration through AI assistants.

Getting started

Add MCPymol to your MCP-capable client — Claude Code, Cursor, Codex, and others — by following the setup at the source, which documents the exact command, configuration, and any required API keys.